大阪大学 先導的学際研究機構

RNAフロンティアサイエンス部門

PUBLICATION

Member’s publication

2022

  1. Ogawa K, Yamada K, Etoh T, Kitagawa M, Shirasaka Y, Noguchi K, Kobayashi T, Nishizono A, Inomata M. Development of an Oncolytic Mammalian Orthoreovirus Expressing the Near-Infrared Fluorescent Protein iRFP720. Journal of Virological Methods, 2022, Oct;308:114574.doi: 10.1016/j.jviromet.2022.114574.
  2. Ngan T. K. P., Nishimura S, Shimizu-Onda Y, Quang D. T., Komine-Aizawa S , Pattara K., Okitsu S , Sato S, Kobayashi T, Niwat M., Hayakawa S, Ushijima H. Emerging norovirus GII.4 Sydney[P31] causing acute gastroenteritis outbreak in children in Japan, during COVID-19, 2021. J Infect Chemother, 2022 Sep;28(9):1347-1351. doi: 10.1016/j.jiac.2022.05.015.
  3. Nojima S, Ishida S, Terayama K, Matsumoto K, Matsui T, Tahara S, Ohshima K, Kiyokawa H, Kido K, Ukon K, Yoshida SY, Mitani TT, Doki Y, Mizushima T, Okuno Y, Susaki EA, Ueda HR, Morii E. A Novel Three-Dimensional Imaging System Based on Polysaccharide Staining for Accurate Histopathological Diagnosis of Inflammatory Bowel Diseases. Cell Mol Gastroenterol Hepatol. 2022;14(4):905-924. doi: 10.1016/j.jcmgh.2022.07.001.
  4. Yamada, T.; Furuita, K.; Sakurabayashi, S.; Nomura, M.; Kojima, C.; and Nakatani, K. NMR determination of the 2:1 binding complex of naphthyridine carbamate dimer (NCD) and CGG/CGG triad in double-stranded DNA. Nucleic Acids Res. 2022 Sep 12:gkac740. doi: 10.1093/nar/gkac740.
  5. Yamazaki T, Yamamoto T, Hirose T. Micellization: A new principle in the formation of biomolecular condensates. Front Mol Biosci. 2022 Aug 29;9:974772. doi: 10.3389/fmolb.2022.974772.
  6. Yamamoto T, Yamazaki T, Hirose T. Triblock copolymer micelle model of spherical paraspeckles. Front Mol Biosci. 2022 Aug 22;9:925058. doi: 10.3389/fmolb.2022.925058.
  7. Matsushita M, Fujita K, Hatano K, Hayashi T, Kayama H, Motooka D, Hase H, Yamamoto A, Uemura T, Yamamichi G, Tomiyama E, Koh Y, Kato T, Kawashima A, Uemura M, Nojima S, Imamura R, Mubeen A, Netto GJ, Tsujikawa K, Nakamura S, Takeda K, Morii E, Nonomura N. High-fat diet promotes prostate cancer growth through histamine signaling. Int J Cancer. 2022 Aug 15;151(4):623-636. doi: 10.1002/ijc.34028.
  8. Onishi T, Takashima T, Kurashige M, Ohshima K, Morii E. Mutually exclusive expression of EZH2 and H3K27me3 in non-small cell lung carcinoma. Pathol Res Pract. 2022 Aug 12;238:154071. doi: 10.1016/j.prp.2022.154071.
  9. Nakatsubo D, Maeda Y, Hosokawa K, Kawada S, Okamoto M, Shimagami H, Tada T, Kiyokawa H, Sato K, Tahara S, Morii E, Narazaki M, Kumanogoh A, A case of relapsing polychondritis localized to the laryngeal cartilage in which FDG-PET/CT was helpful for diagnosis. Scand J Rheumatol 2022 Aug 10;1-3. doi: 10.1080/03009742.2022.2103937.
  10. Matsui T, Iwasa A, Mimura M, Taniguchi S, Sudo T, Uchida Y, Kikuta J, Morizono H, Horii R, Motoyama Y, Morii E, Ohno S, Kiyota Y, Ishii M. Label-free multiphoton excitation imaging as a promising diagnostic tool for breast cancer. Cancer Sci. 2022 Aug;113(8):2916-2925. doi: 10.1111/cas.15428.
  11. Ichihara S, Nagao K, Sakaguchi T, Obuse C, Sado T. SmcHD1 underlies the formation of H3K9me3 blocks on the inactive X chromosome in mice. Development. 2022 Aug 1; 149(15): dev200864. doi: 10.1242/dev.200864.
  12. Tsuchihashi K, Miyoshi N, Fujino S, Kitakaze M, Ohue M, Danno K, Nakamichi I, Ohshima K, Morii E, Uemura M, Doki Y, Eguchi H. Risk Factors for Predicting Lymph Node Metastasis in Submucosal Colorectal Cancer. J Anus Rectum Colon. 2022 Jul 28;6(3):181-189. doi: 10.23922/jarc.2022-002.
  13. Yoshida T, Morihiro K, Naito Y, Mikami A, Kasahara Y, Inoue T, Obika S. Identification of nucleobase chemical modifications that reduce the hepatotoxicity of gapmer antisense oligonucleotides. Nucleic Acids Res. 2022 Jul 22;50(13):7224-7234. doi: 10.1093/nar/gkac562.
  14. Yasumizu Y, Ohkura N, Murata H, Kinoshita M, Funaki S, Nojima S, Kido K, Kohara M, Motooka D, Okuzaki D, Suganami S, Takeuchi E, Nakamura Y, Takeshima Y, Arai M, Tada S, Okumura M, Morii E, Shintani Y, Sakaguchi S, Okuno T, Mochizuki H. Myasthenia gravis-specific aberrant neuromuscular gene expression by medullary thymic epithelial cells in thymoma. Nat Commun. 2022 Jul 22;13(1):4230. doi: 10.1038/s41467-022-31951-8.
  15. Yamasaki T, Horie T, Koyama S, Nakao T, Baba O, Kimura M, Sowa N, Sakamoto K, Yamazaki K, Obika S, Kasahara Y, Kotera J, Oka K, Fujita R, Sasaki T, Takemiya A, Hasegawa K, Minatoya K, Kimura T, Ono K. Inhibition of microRNA-33b specifically ameliorates abdominal aortic aneurysm formation via suppression of inflammatory pathways. Sci Rep. 2022 Jul 14;12(1):11984. doi: 10.1038/s41598-022-16017-5.
  16. Wu Y, Li P, Liu L, Goodwin AJ, Halushka PV, Hirose T, Nakagawa S, Zhou J, Liu M, Fan H. lncRNA Neat1 regulates neuronal dysfunction post-sepsis via stabilization of hemoglobin subunit beta. Mol Ther. 2022 Jul 6;30(7):2618-2632. doi: 10.1016/j.ymthe.2022.03.011.
  17. Fukada A, Takahashi T, Kurokawa Y, Asaoka T, Teranishi R, Saito T, Yamamoto K, Yamashita K, Tanaka K, Makino T, Nakajima K, Umeda D, Morii E, Hirota S, Eguchi H, Doki Y. Laparoscopic resection for recurrent gastrointestinal stromal tumors and paraganglioma in a patient with Carney-Stratakis syndrome: A case report. Asian J Endosc Surg. 2022 Jul 6. doi: 10.1111/ases.13104.
  18. Kubo A, Tanei T, R Pradipta A, Morimoto K, Fujii M, Sota Y, Miyake T, Kagara N, Shimoda M, Naoi Y, Motoyama Y, Morii E, Tanaka K, Shimazu K. Comparison of “click-to-sense” assay with frozen section analysis using simulated surgical margins in breast cancer patients. Eur J Surg Oncol. 2022 Jul;48(7):1520-1526. doi: 10.1016/j.ejso.2022.04.003.
  19. Samejima H, Ose N, Sakurai T, Nagata H, Morii E, Shintani Y. G-CSF-producing left lung squamous cell carcinoma positive for ROS1 rearrangements completely resected after neoadjuvant radiation chemotherapy: A case report. Respir Med Case Rep. 2022 Jun 27;38:101697. doi: 10.1016/j.rmcr.2022.101697.
  20. Yamada S, Kijima N, Kinoshita M, Shinzaki S, Sato K, Kido K, Hirayama R, Kagawa N, Takehara T, Morii E, Kishima H. Cerebellopontine angle metastasis of a neuroendocrine tumor mimicking vestibular schwannoma: A case report. Surg Neurol Int. 2022 Jun 23;13:264. doi: 10.25259/SNI_117_2022.
  21. Nakagawa S, Yamazaki T, Mannen T, Hirose T. ArcRNAs and the formation of nuclear bodies. Mamm Genome. 2022 Jun; 33(2):382-401. doi: 10.1007/s00335-021-09881-5.
  22. Cell type-specific abnormalities of central nervous system in myotonic dystrophy type 1. Nakamori M, Shimizu H, Ogawa K, Hasuike Y, Nakajima T, Sakurai H, Araki T, Okada Y, Kakita A, Mochizuki H. Brain Commun. 2022 Jun 10;4(3):fcac154. doi: 10.1093/braincomms/fcac154.
  23. Umehara T, Arita H, Miya F, Achiha T, Shofuda T, Yoshioka E, Kanematsu D, Nakagawa T, Kinoshita M, Kagawa N, Fujimoto Y, Hashimoto N, Kiyokawa H, Morii E, Tsunoda T, Kanemura Y, Kishima H. Revisiting the definition of glioma recurrence based on a phylogenetic investigation of primary and re-emerging tumor samples: a case report. Brain Tumor Pathol. 2022 Jun 6. doi: 10.1007/s10014-022-00438-1.
  24. Nouda R, Kawagishi T, Kanai Y, Shimojima M, Saijo M, Matsuura Y, Kobayashi T. The nonstructural p17 protein of a fusogenic bat-borne reovirus regulates viral replication in virus species- and host-specific manners. PLOS Pathogens. 2022 Jun 2;18(6):e1010553. doi: 10.1371/journal.ppat.1010553.
  25. Sasaki T, Hirakawa Y, Yamairi F, Kurita T, Murahashi K, Nishimura H, Iwazaki N, Yasuhara H, Tateoka T, Ohta T, Obika S, Kotera J. Altered Biodistribution and Hepatic Safety Profile of a Gapmer Antisense Oligonucleotide Bearing Guanidine-Bridged Nucleic Acids. Nucleic Acid Ther. 2022 Jun;32(3):177-184. doi: 10.1089/nat.2021.0034.
  26. Kiyokawa H, Abe M, Matsui T, Kurashige M, Ohshima K, Tahara S, Nojima S, Ogino T, Sekido Y, Mizushima T, Morii E. Deep Learning Analysis of Histologic Images from Intestinal Specimen Reveals Adipocyte Shrinkage and Mast Cell Infiltration to Predict Postoperative Crohn Disease. Am J Pathol. 2022 Jun;192(6):904-916. doi: 10.1016/j.ajpath.2022.03.006.
  27. Omuro S, Yamaguchi T, Kawase T, Terasaki M, Hirose K, Obika S. Physicochemical property evaluation of modified oligonucleotides by traveling-wave ion mobility mass spectrometry. Rapid Commun Mass Spectrom. 2022 May30;36(10):e9279. doi: 10.1002/rcm.9279.
  28. Sano E, Suzuki T, Hashimoto R, Itoh Y, Sakamoto A, Sakai Y, Saito A, Okuzaki D, Motooka D, Muramoto Y, Noda T, Takasaki T, Sakuragi J, Minami S, Kobayashi T, Yamamoto T, Matsumura Y, Nagao M, Okamoto T, Takayama K. Cell response analysis in SARS-CoV-2 infected bronchial organoids. Commun Biol. 2022 May 30;5(1):516. doi: 10.1038/s42003-022-03499-2.
  29. Hussain F, Rahman FI, Saha P, Mikami A, Osawa T, Obika S, Rahman SMA. Synthesis of Sugar and Nucleoside Analogs and Evaluation of Their Anticancer and Analgesic Potentials. Molecules. 2022 May 29;27(11):3499. doi: 10.3390/molecules27113499.
  30. Premature translation termination mediated non-ER stress induced ATF6 activation by a ligand-dependent ribosomal frameshifting circuit. Hsu H T, Murata A, Dohno C, Nakatani K, Chang K. Nucleic Acids Res. 2022, May 20;50(9) 5369-5383. doi.org/10.1093/nar/gkac257.
  31. Murai H, Kodama T, Maesaka K, Tange S, Motooka D, Suzuki Y, Shigematsu Y, Inamura K, Mise Y, Saiura A, Ono Y, Takahashi Y, Kawasaki Y, Iino S, Kobayashi S, Idogawa M, Tokino T, Hashidate-Yoshida T, Shindou H, Miyazaki M, Imai Y, Tanaka S, Mita E, Ohkawa K, Hikita H, Sakamori R, Tatsumi T, Eguchi H, Morii E, Takehara T. Multiomics identifies the link between intratumor steatosis and the exhausted tumor immune microenvironment in hepatocellular carcinoma. Hepatology. 2022 May 14. doi: 10.1002/hep.32573.
  32. Kita R, Osawa T, Obika S. Conjugation of oligonucleotides with activated carbamate reagents prepared by the Ugi reaction for oligonucleotide library synthesis. RSC Chem Biol. 2022 Apr 19;3(6):728-738. doi: 10.1039/d1cb00240f.
  33. Kato Y, Watanabe H. Regulation of Doublesex1 Expression for Environmental Sex Determination in the Cladoceran Crustacean Daphnia. Front Cell Dev Biol. 2022 Apr 13; 10:881255. doi: 10.3389/fcell.2022.881255.
  34. Beck G, Shigenobu K, Ukon K, Yamashita R, Yonenobu Y, Morii E, Hasegawa M, Ikeda M, Murayama S, Mochizuki H. An autopsy case of Alzheimer’s disease with amygdala-predominant Lewy pathology presenting with frontotemporal dementia-like psychiatric symptoms. Neuropathology. 2022 Apr;42(2):147-154. doi: 10.1111/neup.12786.
  35. Tung P., Hatazawa R, Komoto S, Nishimura S, Pattara K., Ngan T. K. P., Okitsu S, Kobayashi T , Niwat M., Hayakawa S, Ushijima H. Whole genome sequence of an uncommon G9P[4] species A rotavirus containing DS-1-like (genotype 2) genes in Japan. Archives of Virology, 167(7): 1603-1606, 2022.
  36. Tung P., Kobayashi M, Nagasawa , Hatazawa R, Ngan T. K. P., Miyashita H, Komoto S, Tajima T, Baba T, Okitsu S, Pattara K., Niwat M., Kimura H, Kobayashi T, Hayakawa S, Ushijima H. Whole genome sequencing and evolutionary analysis of G8P [8] rotaviruses emerging in Japan. Virus disease, 33(2):215-218,2022